Python Module Index

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i
indra
    indra.assemblers.cx.assembler
    indra.assemblers.cyjs.assembler
    indra.assemblers.english.assembler
    indra.assemblers.graph.assembler
    indra.assemblers.html.assembler
    indra.assemblers.index_card.assembler
    indra.assemblers.indranet
    indra.assemblers.indranet.assembler
    indra.assemblers.indranet.net
    indra.assemblers.kami.assembler
    indra.assemblers.pybel.assembler
    indra.assemblers.pysb.assembler
    indra.assemblers.pysb.base_agents
    indra.assemblers.pysb.bmi_wrapper
    indra.assemblers.pysb.kappa_util
    indra.assemblers.pysb.preassembler
    indra.assemblers.sbgn.assembler
    indra.assemblers.sif.assembler
    indra.assemblers.tsv.assembler
    indra.belief
    indra.belief.skl
    indra.databases
    indra.databases.biolookup_client
    indra.databases.cbio_client
    indra.databases.chebi_client
    indra.databases.chembl_client
    indra.databases.context_client
    indra.databases.doid_client
    indra.databases.drugbank_client
    indra.databases.efo_client
    indra.databases.go_client
    indra.databases.hgnc_client
    indra.databases.hp_client
    indra.databases.identifiers
    indra.databases.ido_client
    indra.databases.lincs_client
    indra.databases.mesh_client
    indra.databases.mirbase_client
    indra.databases.ndex_client
    indra.databases.obo_client
    indra.databases.owl_client
    indra.databases.pubchem_client
    indra.databases.taxonomy_client
    indra.databases.uniprot_client
    indra.explanation.model_checker.model_checker
    indra.explanation.model_checker.pybel
    indra.explanation.model_checker.pysb
    indra.explanation.model_checker.signed_graph
    indra.explanation.model_checker.unsigned_graph
    indra.explanation.pathfinding.pathfinding
    indra.explanation.pathfinding.util
    indra.explanation.reporting
    indra.literature
    indra.literature.adeft_tools
    indra.literature.biorxiv_client
    indra.literature.coci_client
    indra.literature.crossref_client
    indra.literature.elsevier_client
    indra.literature.newsapi_client
    indra.literature.pmc_client
    indra.literature.pubmed_client
    indra.mechlinker
    indra.ontology
    indra.ontology.app
    indra.ontology.bio
    indra.ontology.bio.__main__
    indra.ontology.bio.ontology
    indra.ontology.ontology_graph
    indra.ontology.standardize
    indra.ontology.virtual
    indra.ontology.virtual.ontology
    indra.pipeline
    indra.pipeline.decorators
    indra.pipeline.pipeline
    indra.preassembler
    indra.preassembler.custom_preassembly
    indra.preassembler.grounding_mapper
    indra.preassembler.grounding_mapper.analysis
    indra.preassembler.grounding_mapper.disambiguate
    indra.preassembler.grounding_mapper.gilda
    indra.preassembler.grounding_mapper.mapper
    indra.preassembler.refinement
    indra.preassembler.sitemapper
    indra.resources
    indra.sources.acsn
    indra.sources.acsn.api
    indra.sources.acsn.processor
    indra.sources.bel.api
    indra.sources.bel.processor
    indra.sources.biofactoid
    indra.sources.biofactoid.api
    indra.sources.biofactoid.processor
    indra.sources.biogrid
    indra.sources.biopax
    indra.sources.biopax.api
    indra.sources.biopax.processor
    indra.sources.creeds
    indra.sources.creeds.api
    indra.sources.creeds.processor
    indra.sources.crog
    indra.sources.crog.api
    indra.sources.crog.processor
    indra.sources.ctd
    indra.sources.ctd.api
    indra.sources.ctd.processor
    indra.sources.dgi
    indra.sources.dgi.api
    indra.sources.dgi.processor
    indra.sources.drugbank
    indra.sources.drugbank.api
    indra.sources.drugbank.processor
    indra.sources.eidos
    indra.sources.eidos.api
    indra.sources.eidos.bio_processor
    indra.sources.eidos.cli
    indra.sources.eidos.client
    indra.sources.eidos.processor
    indra.sources.eidos.reader
    indra.sources.eidos.server
    indra.sources.geneways.api
    indra.sources.geneways.processor
    indra.sources.gnbr
    indra.sources.gnbr.api
    indra.sources.gnbr.processor
    indra.sources.hprd
    indra.sources.hprd.api
    indra.sources.hprd.processor
    indra.sources.hypothesis
    indra.sources.hypothesis.api
    indra.sources.hypothesis.processor
    indra.sources.indra_db_rest
    indra.sources.indra_db_rest.api
    indra.sources.indra_db_rest.processor
    indra.sources.indra_db_rest.query
    indra.sources.isi
    indra.sources.isi.api
    indra.sources.isi.processor
    indra.sources.medscan
    indra.sources.medscan.api
    indra.sources.medscan.processor
    indra.sources.minerva
    indra.sources.minerva.api
    indra.sources.minerva.processor
    indra.sources.ndex_cx.api
    indra.sources.ndex_cx.processor
    indra.sources.omnipath
    indra.sources.omnipath.api
    indra.sources.omnipath.processor
    indra.sources.phosphoelm
    indra.sources.phosphoelm.api
    indra.sources.phosphoelm.processor
    indra.sources.reach
    indra.sources.reach.api
    indra.sources.reach.processor
    indra.sources.reach.reader
    indra.sources.rlimsp
    indra.sources.rlimsp.api
    indra.sources.rlimsp.processor
    indra.sources.signor.api
    indra.sources.signor.processor
    indra.sources.sparser
    indra.sources.sparser.api
    indra.sources.tas
    indra.sources.tas.api
    indra.sources.tas.processor
    indra.sources.tees.api
    indra.sources.tees.processor
    indra.sources.trips.api
    indra.sources.trips.client
    indra.sources.trips.drum_reader
    indra.sources.trips.processor
    indra.sources.trrust
    indra.sources.trrust.api
    indra.sources.trrust.processor
    indra.sources.ubibrowser
    indra.sources.ubibrowser.api
    indra.sources.ubibrowser.processor
    indra.sources.utils
    indra.sources.virhostnet
    indra.sources.virhostnet.api
    indra.sources.virhostnet.processor
    indra.statements.agent
    indra.statements.concept
    indra.statements.context
    indra.statements.evidence
    indra.statements.io
    indra.statements.resources
    indra.statements.statements
    indra.statements.util
    indra.statements.validate
    indra.tools.assemble_corpus
    indra.tools.executable_subnetwork
    indra.tools.fix_invalidities
    indra.tools.gene_network
    indra.tools.hypothesis_annotator
    indra.tools.incremental_model
    indra.tools.machine
    indra.util.aws
    indra.util.get_version
    indra.util.nested_dict
    indra.util.plot_formatting
    indra.util.statement_presentation